BrainVISA volume formats

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Formats

gz compressed NIFTI-1 image
NIFTI-1 image
GIS image
MINC image
gz compressed MINC image
SPM image
ECAT v image
ECAT i image
FreesurferMGZ
FreesurferMGH
Z compressed VIDA image
gz compressed VIDA image
Z compressed SPM image
gz compressed SPM image
Z compressed ECAT v image
gz compressed ECAT v image
Z compressed ECAT i image
gz compressed ECAT i image
JPEG image
GIF image
PNG image
BMP image
PBM image
PGM image
PPM image
XBM image
XPM image
TIFF image
TIFF(.tif) image
Directory
FDF image
VIDA image
gz compressed GIS image
Z compressed GIS image

Defined in file: brainvisa/types/builtin.py

Used in the following processes

Associated types

3D Functional volume
3D Volume
4D Functional volume
4D Volume
AC/PC DW Diffusion MR
AC/PC T2 Diffusion MR
anatomical Mask Template
anatomical Template
Anatomist BIC drawing
Ancillary Volume
Ancillary Volume DARTEL
Ancillary Volume DISCO
Ancillary Volume DISCO DARTEL
Ancillary Volume Inversed DARTEL
Ancillary Volume Inversed DARTEL and DISCO
Ancillary Volume Inversed DARTEL and DISCO Dest Native
Ancillary Volume Inversed DARTEL Dest Native
Ancillary Volume Inversed DISCO
Ancillary Volume Inversed DISCO Dest Native
Apparent Diffusion Coefficient
Atlas
Atlas DARTEL
Atlas DARTEL MNI
Atlas DARTEL Native
Atlas DISCO
Atlas DISCO DARTEL
Atlas DISCO DARTEL MNI
Atlas DISCO DARTEL Native
Atlas Inversed DARTEL
Atlas Inversed DARTEL and DISCO
Atlas Inversed DARTEL and DISCO Dest Native
Atlas Inversed DARTEL and DISCO Origin Native
Atlas Inversed DARTEL and DISCO Origin Native Dest Native
Atlas Inversed DARTEL Dest Native
Atlas Inversed DARTEL Origin Native
Atlas Inversed DARTEL Origin Native Dest Native
Atlas Inversed DISCO
Atlas Inversed DISCO DARTEL
atlas label volume
atlas labelled MNI Mask
Average cortical ribbon DISCO DARTEL
Average T1 MRI Bias Brain Alone DISCO DARTEL
Average T1 MRI Bias DISCO DARTEL
Baby Automatic Grey White Mask
Baby Grey White Mask
Baby Manual White Mask
Baby White Ridges
Biological glass slides
Biological image
Biological volume
Both CSF Mask
Both CSF+GREY Mask
Bottom Volume
Brain Mask
Brain Mask DISCO DARTEL
Bundles Volume
CAT shooting template
CAT template
Central Nuclei Template
Cerebellum ROI
CGN ROI
Cingular Pole Template
Cingular Pole Template Subject
Classification Image By Fusion Level
Corpus Callosum mask
Corrected DW Diffusion MR
Correlation Quality Map
Cortex Catchment Bassins
Cortex Skeleton
Crop PET Image
CSF Probability Map
CSF+GREY Mask
CSFluid Probability Map
CT
CT Hoffman reference
CT outline
CT shifted
Dartel Template
Deep Nuclei Mask
DefField T1 MRI from Mni to PetSpc
DefField T1 MRI from Native to Mni
DefField T1 MRI from PetSpc to Mni
Deformation Field of T1 MRI
Difference Phase Map
Diffusion Anisotropy
Diffusion Density Map
Diffusion Orientation Map
Diffusion Scalar Map
Diffusion Standard Deviation
Diffusion Weighted T2
Divergence map
Double echo complex image
DW Diffusion MR
Dyn3D PET
Echo magnitude image
Emission PET
explicit mask for SPM analysis
Extended AC/PC DW Diffusion MR
Extended AC/PC T2 Diffusion MR
FFD Displacement Field
FFD Field defData DARTEL
FFD Field defData DARTEL A Native TO B
FFD Field defData DARTEL A Native TO B Native
FFD Field defData DARTEL A TO B
FFD Field defData DARTEL A TO B Native
FFD Field defData DARTEL Native
FFD Field defData DISCO
FFD Field defData DISCO A Native TO B
FFD Field defData DISCO A Native TO B Native
FFD Field defData DISCO A TO B
FFD Field defData DISCO A TO B Native
FFD Field defData DISCO DARTEL
FFD Field defData DISCO DARTEL A Native TO B
FFD Field defData DISCO DARTEL A Native TO B Native
FFD Field defData DISCO DARTEL A TO B
FFD Field defData DISCO DARTEL A TO B Native
FFD Field defData DISCO DARTEL Native
FFD Field defData DISCO Native
FFD Field defData Inversed DARTEL
FFD Field defData Inversed DARTEL A Native TO B
FFD Field defData Inversed DARTEL A Native TO B Native
FFD Field defData Inversed DARTEL A TO B
FFD Field defData Inversed DARTEL A TO B Native
FFD Field defData Inversed DARTEL Native
FFD Field defData Inversed DISCO
FFD Field defData Inversed DISCO A Native TO B
FFD Field defData Inversed DISCO A Native TO B Native
FFD Field defData Inversed DISCO A TO B
FFD Field defData Inversed DISCO A TO B Native
FFD Field defData Inversed DISCO DARTEL
FFD Field defData Inversed DISCO DARTEL A Native TO B
FFD Field defData Inversed DISCO DARTEL A Native TO B Native
FFD Field defData Inversed DISCO DARTEL A TO B
FFD Field defData Inversed DISCO DARTEL A TO B Native
FFD Field defData Inversed DISCO DARTEL Native
FFD Field defData Inversed DISCO Native
FLAIR MRI
FLAIR MRI mid-point average
Flow Field DARTEL
Flow Field DISCO DARTEL
fMRI
fMRI activations
Fractional Anisotropy
Functional mask
Functional template
Fus Det
Fus Det WM
GM Probability Map
Grey Mask Corrected
Grey Mask Corrected DARTEL
Grey Mask Corrected DARTEL MNI
Grey Mask Corrected DISCO
Grey Mask Corrected DISCO DARTEL
Grey Mask Corrected DISCO DARTEL MNI
Grey matter Probability Map
grey probability map
Grey White Mask
Grey White Mask Corrected DISCO
Grey White Mask Corrected DISCO DARTEL
Grey White Mask Corrected Inversed DARTEL and DISCO
Grey White Mask Corrected Inversed DARTEL and DISCO Dest Native
Grey White Mask Corrected Inversed DARTEL and DISCO Origin Native
Grey White Mask Corrected Inversed DARTEL and DISCO Origin Native Dest Native
Grey White Mid-Interface Volume
Gyri White Volume
HDW DARTEL flow field
Head Mask
Hemispheres Template
Hoffman region mask
Hull Junction Volume
Interpolated PET
Intracranial labels
Intracranial mask
Jacobian determinant
Label volume
labelForStatistic MNI Mask
labelForStatistic MNI Mask from result map
Left Cingular Pole Template
Left Cingular Pole Template Subject
Left coarse parcellation volume
Left Cortex Catchment Bassins
Left Cortex Skeleton
Left CSF Mask
Left CSF+GREY Mask
Left Grey White Mask
Left Gyri Volume
Left model parcellation volume
Left parcellation volume
Left Sulci Mask
Lesion distance map
Lesion Mask
Max PET projection
Maximum Eigenvector
Morphologist Grey White Mask
MRI Ext Edge Image
MRI Ini
Nobias Inversed DARTEL and DISCO
Nobias Inversed DARTEL and DISCO Dest Native
Nobias Inversed DARTEL and DISCO Origin Native
Nobias Inversed DARTEL and DISCO Origin Native Dest Native
Nobias Normalized Inversed DARTEL and DISCO
Nobias Normalized Inversed DARTEL and DISCO Dest Native
Nobias Normalized Inversed DARTEL and DISCO Origin Native
Nobias Normalized Inversed DARTEL and DISCO Origin Native Dest Native
Non oriented DW Diffusion MR
Normalized PET
Normalized SPECT
OLD MRI T1 RawNii
OLD PetSubject MNI ROI Reference
OLD PetSubject MNI ROI Statistic
OLD PetSubject MRI
OLD PetSubject MRI T1 Bias Corrected
OLD PetSubject MRI T1 Bias Field SPM
OLD PetSubject MRI T1 Coregistered
OLD PetSubject MRI T1 CSF Probability Map SPM
OLD PetSubject MRI T1 Forward Deformation Field SPM
OLD PetSubject MRI T1 Grey matter Mask
OLD PetSubject MRI T1 Inverse Deformation Field SPM
OLD PetSubject MRI T1 Mask
OLD PetSubject MRI T1 MNI
OLD PetSubject MRI T1 MNI Grey
OLD PetSubject MRI T1 MNI Grey matter Mask
OLD PetSubject MRI T1 Nat Grey
OLD PetSubject MRI T1 Nat White
OLD PetSubject MRI T1 Native
OLD PetSubject MRI T1 Native OLD
OLD PetSubject MRI T1 Old
OLD PetSubject MRI T1 PetSpc Grey
OLD PetSubject MRI T1 PetSpc Grey Mask
OLD PetSubject MRI T1 PetSpc White
OLD PetSubject MRI T1 RawNii
OLD PetSubject MRI T1 Scalp Probability Map SPM
OLD PetSubject MRI T1 Skull Probability Map SPM
OLD PetSubject MRI T1 White matter Mask
OLD PetSubject PET Reseted
OLD T1 MRI Tissue Probability Map
OLD T1MRI T1 Native
OLD T1MRI T1 RawNii
OLD2 PetSubject PET Reseted
P:Atlas Clique Matrix
P:Atlas Labels
P:Atlas Lateralization
P:Atlas Prior
P:Atlas Raw Labels
P:Atlas Raw Lateralization
P:Atlas Raw Prior
P:Atlas Raw Skull Stripping Mask
P:Atlas Raw Template
P:Atlas Registered Labels
P:Atlas Registered Lateralization
P:Atlas Registered Prior
P:Atlas Registered Skull Stripping Mask
P:Atlas Registered Template
P:Atlas Skull Stripping Mask
P:Atlas Template
P:Cleaned Parcellation
P:CSF Mask
P:EM Parcellation
P:EM Parcellation Proba
P:EM Prior Proba
P:Final Parcellation
P:Inverted MRI Bias Corrected
P:Inverted MRI Mean Curvature
P:Inverted T1 MRI Bias Corrected
P:Inverted T1 MRI Mean Curvature
P:Inverted T2 MRI Bias Corrected
P:Inverted T2 MRI Mean Curvature
P:Morpho Skull Stripping Mask
P:MRI
P:MRI Bias Corrected
P:MRI Bias Field
P:MRI Edges
P:MRI EM Bias Corrected
P:MRI EM Bias Field
P:MRI Filtered For Histo
P:MRI Mean Curvature
P:MRI N3 Bias Corrected
P:MRI N4 Bias Corrected
P:MRI N4 Bias Field
P:MRI Raw
P:MRI Raw Brain Masked
P:MRI Variance
P:MRI VIP Bias Corrected
P:MRI VIP Bias Field
P:MRI White Matter Ridges
P:Parcellation
P:Parcellation Proba
P:Pre Parcellation
P:Prior Proba
P:Reference Parcellation
P:Reference Parcellation Mask
P:Registration Target
P:Skull Stripping Mask
P:T1 MRI
P:T1 MRI Bias Corrected
P:T1 MRI Mean Curvature
P:T1 MRI Raw
P:T1 MRI Raw Brain Masked
P:T1 MRI Registration Target
P:T2 MRI
P:T2 MRI Bias Corrected
P:T2 MRI Mean Curvature
P:T2 MRI Raw
P:T2 MRI Raw Brain Masked
P:T2 MRI Registration Target
Parallel Diffusion Coefficient
Parametric SPECT
Parcellation volume
PET
PET mean
PET mean intersected
PET mean intersected smoothed
PET mean smoothed
PET outline
PET parametric
PET parametric intersected
PET parametric intersected smoothed
PET parametric smoothed
PET raw ecat
PET SUV
PET Template
PetSubject
PetSubject CT
PetSubject CT Background Mask
PetSubject CT Caude Mask
PetSubject CT Contour
PetSubject CT Coregistered
PetSubject CT CtNativeSpace
PetSubject CT Grey matter lite Mask
PetSubject CT Grey matter Mask
PetSubject CT Mask
PetSubject CT Putamen Mask
PetSubject CT Shifted
PetSubject CT White matter Mask
PetSubject CTOld
PetSubject CTOld Contour
PetSubject label
PetSubject Label Statistic
PetSubject Mask
PetSubject MNI Label Statistic
PetSubject MNI ROI Mask
PetSubject MNI ROI Reference
PetSubject MNI ROI Statistic
PetSubject MRI
PetSubject MRI MNISpace
PetSubject MRI T1 Bias Corrected OLD2
PetSubject MRI T1 Bias Field SPM
PetSubject MRI T1 Coregistered
PetSubject MRI T1 CSF Probability Map SPM OLD2
PetSubject MRI T1 Forward Deformation Field SPM OLD2
PetSubject MRI T1 Grey matter Mask OLD2
PetSubject MRI T1 Inverse Deformation Field SPM OLD2
PetSubject MRI T1 Label Statistic
PetSubject MRI T1 Mask
PetSubject MRI T1 MNI AllTissues Template
PetSubject MRI T1 MNI Grey matter Mask OLD2
PetSubject MRI T1 MNI Grey OLD2
PetSubject MRI T1 MNI Grey Template
PetSubject MRI T1 MNI Grey Template smoothed
PetSubject MRI T1 MNI OLD2
PetSubject MRI T1 MNI Template
PetSubject MRI T1 Nat Full Template
PetSubject MRI T1 Nat Grey OLD2
PetSubject MRI T1 Nat Grey Template
PetSubject MRI T1 Nat Template
PetSubject MRI T1 Nat White OLD2
PetSubject MRI T1 Native OLD
PetSubject MRI T1 Native OLD2
PetSubject MRI T1 Old
PetSubject MRI T1 PetSpc
PetSubject MRI T1 PetSpc Bias Corrected
PetSubject MRI T1 PetSpc CSF
PetSubject MRI T1 PetSpc Grey
PetSubject MRI T1 PetSpc Grey Mask
PetSubject MRI T1 PetSpc Tissue Mask
PetSubject MRI T1 PetSpc White
PetSubject MRI T1 RawNii OLD
PetSubject MRI T1 ROI Mask
PetSubject MRI T1 ROI Reference
PetSubject MRI T1 ROI Statistic
PetSubject MRI T1 Scalp Probability Map SPM OLD2
PetSubject MRI T1 Skull Probability Map SPM OLD2
PetSubject MRI T1 White matter Mask OLD2
PetSubject PET
PetSubject PET Background Mask
PetSubject PET Caude Mask
PetSubject PET Contour
PetSubject PET Coregistered
PetSubject PET Coregistered Grey
PetSubject PET Dyn 4D
PetSubject PET Grey
PetSubject PET Grey matter lite Mask
PetSubject PET Grey matter Mask
PetSubject PET Mask
PetSubject PET Masked by Grey Matter
PetSubject PET Masked by White Matter
PetSubject PET Mean
PetSubject PET Mean PVC
PetSubject PET Mean Resized
PetSubject PET MNI
PetSubject PET MNI Grey
PetSubject PET MNI Grey parametric
PetSubject PET MNI Grey parametric smoothed
PetSubject PET MNI Grey smoothed
PetSubject PET MNI intersected on matter mask
PetSubject PET MNI intersected on matter mask smoothed
PetSubject PET MNI Masked by Grey Matter
PetSubject PET MNI Masked by White Matter
PetSubject PET MNI parametric
PetSubject PET MNI parametric intersected on matter mask
PetSubject PET MNI parametric intersected on matter mask smoothed
PetSubject PET MNI parametric smoothed
PetSubject PET MNI resultMap
PetSubject PET MNI smoothed
PetSubject PET MNI Template
PetSubject PET MNI Template smoothed
PetSubject PET MNISpace
PetSubject PET MriNativeSpace
PetSubject PET parametric OLD
PetSubject PET parametric smoothed OLD
PetSubject PET PetNativeSpace
PetSubject PET Putamen Mask
PetSubject PET Reseted
PetSubject PET SubVolume Mean
PetSubject PET SubVolume Mean PVC
PetSubject PET SUV
PetSubject PET SUV PVC
PetSubject PET SUV smoothed
PetSubject PET SUVR
PetSubject PET SUVR smoothed
PetSubject PET White matter Mask
PetSubject ROI
PetSubject ROI Reference
PetSubject ROIReference
PetSubject ROIReference MNI Grey
PetSubject ROIReference MNI intersectWithImage
PetSubject ROIStat
PetSubject ROIStat PET Mask
Phantom
Phantom CT
Phantom CT Segmented
Phantom Nii
Phantom PET
Phantom PET Dyn
Phantom PET Mean
Phantom PET Mean Segmented
Phantom Rods
Phantom Rods Sum
Phantom ROI Sph
Phantom ROI Sph Ghosts
Phantom ROI Sph inNoise
Probabilities Volume
Probability Map
Projection convolution kernels
quantitative analysis label volume
Rainbow 3D volume
Raw DW Diffusion MR
Raw FLAIR MRI
Raw Spectroscopy Data
Raw T1 MRI
Raw T1 MRI Brain Masked
Raw T2 Diffusion MR
reference region mask
Registered Raw T1 MRI with fMRI
Resamp Spline Image
RGB Eigenvector
Right Cingular Pole Template
Right Cingular Pole Template Subject
Right coarse parcellation volume
Right Cortex Catchment Bassins
Right Cortex Skeleton
Right CSF Mask
Right CSF+GREY Mask
Right Grey White Mask
Right Gyri Volume
Right model parcellation volume
Right parcellation volume
Right Sulci Mask
ROI MNI Mask
ROIExtracted MNI Mask
ROIForStatistic MNI Mask
ROIReference MNI Mask
Simple Surface Volume
Simulated MRI
SPECT coregistered reference space
SPECT coregistered subject space
SPECT coregistered to reference SPECT
SPECT mean coregistered reference space
SPECT MNI
SPECT native
SPECT native masked
SPECT native mean
SPECT native resampled
SPECT native smoothed
SPECT parametric
SPECT parametric MNI
SPECT parametric native
SPECT quantification ROI image
SPECT reference CT coregistered on subject CT
SPECT subject CT coregistered
SPECT subject CT native
SPECT template
SPECT Volume
Spectroscopy Data
Split Brain Mask
SPM deformation field
SPM field
spm filtered image
SPM labelled filtered image
SPM single subject
SPM TPM HDW DARTEL template
SPM TPM template
SPMt map
Subcortical labels
Sulcal Imprint Def Full Bottom
Sulcal Imprint Def Full Bottom DARTEL
Sulcal Imprint Def Full Bottom DARTEL MNI
Sulcal Imprint Def Full Hull Junction
Sulcal Imprint Def Full Hull Junction DARTEL
Sulcal Imprint Def Full Hull Junction DARTEL MNI
Sulcal Imprint Full Bottom
Sulcal Imprint Full Bottom DARTEL
Sulcal Imprint Full Bottom DARTEL MNI
Sulcal Imprint Full Bottom DARTEL Talairach
Sulcal Imprint Full Bottom DISCO
Sulcal Imprint Full Bottom DISCO DARTEL Talairach
Sulcal Imprint Full Bottom DISCO Talairach
Sulcal Imprint Full Bottom Talairach
Sulcal Imprint Full Hull Junction
Sulcal Imprint Full Hull Junction DARTEL
Sulcal Imprint Full Hull Junction DARTEL MNI
Sulcal Imprint Full Hull Junction DARTEL Talairach
Sulcal Imprint Full Hull Junction DISCO
Sulcal Imprint Full Hull Junction DISCO DARTEL Talairach
Sulcal Imprint Full Hull Junction DISCO Talairach
Sulcal Imprint Full Hull Junction Talairach
Sulci Volume
Sulci Voronoi
Sulci White Volume Patch
Sum Image
Sum PET projection
T1 Brain Mask
T1 Cortical Ribbon DISCO DARTEL
T1 MRI
T1 MRI 4D Bias Normalized DISCO DARTEL
T1 MRI AC/PC oriented
T1 MRI Bias Corrected
T1 MRI Bias Corrected DARTEL
T1 MRI Bias Corrected DARTEL MNI
T1 MRI Bias Corrected DARTEL Native
T1 MRI Bias Corrected DISCO
T1 MRI Bias Corrected DISCO DARTEL
T1 MRI Bias Corrected DISCO DARTEL MNI
T1 MRI Bias Corrected DISCO DARTEL Native
T1 MRI Bias Corrected Inversed DARTEL
T1 MRI Bias Corrected Inversed DARTEL Dest Native
T1 MRI Bias Corrected Inversed DARTEL Origin Native
T1 MRI Bias Corrected Inversed DARTEL Origin Native Dest Native
T1 MRI Bias corrected NM
T1 MRI Bias Corrected Normalized
T1 MRI Bias Corrected Normalized DARTEL
T1 MRI Bias Corrected Normalized DARTEL Native
T1 MRI Bias Corrected Normalized DARTEL Template
T1 MRI Bias Corrected Normalized DISCO
T1 MRI Bias Corrected Normalized DISCO DARTEL
T1 MRI Bias Corrected Normalized DISCO DARTEL Native
T1 MRI Bias Corrected Normalized DISCO Talairach
T1 MRI Bias Corrected Normalized DISCO Template
T1 MRI Bias Corrected Normalized Inversed DARTEL
T1 MRI Bias Corrected Normalized Inversed DARTEL Dest Native
T1 MRI Bias Corrected Normalized Inversed DARTEL Origin Native
T1 MRI Bias Corrected Normalized Inversed DARTEL Origin Native Dest Native
T1 MRI Bias Corrected Normalized Masked DISCO DARTEL
T1 MRI Bias Corrected Normalized Talairach
T1 MRI Bias Corrected Normalized Template
T1 MRI Bias field
T1 MRI brain labels
T1 MRI Denoised
T1 MRI Denoised and Bias Corrected
T1 MRI Edges
T1 MRI Filtered For Histo
T1 MRI Filtered For Histo PetSpc
T1 MRI intracranial labels
T1 MRI Mean Curvature
T1 MRI mid-point average
T1 MRI Mni
T1 MRI Mni GreyMask
T1 MRI Mni GreyProba
T1 MRI Mni GreyProba Dartel imported
T1 MRI Mni Space Dartel imported Tissue Probability Map
T1 MRI Mni Space Tissue Mask
T1 MRI Mni Space Tissue Probability Map
T1 MRI Mni WhiteMask
T1 MRI Nat BrainMask
T1 MRI Nat CSFMask
T1 MRI Nat GreyMask
T1 MRI Nat reseted
T1 MRI Nat ScalpMask
T1 MRI Nat SkullMask
T1 MRI Nat WhiteMask
T1 MRI Native Space Tissue Mask
T1 MRI partial volume estimation
T1 MRI PetSpc CSFProba
T1 MRI PetSpc GreyMask
T1 MRI PetSpc GreyProba
T1 MRI PetSpc ScalpProba
T1 MRI PetSpc SkullProba
T1 MRI PetSpc Space Tissue Mask
T1 MRI PetSpc Space Tissue Probability Map
T1 MRI PetSpc WhiteMask
T1 MRI PetSpc WhiteProba
T1 MRI Tissue Mask
T1 MRI tissue probability map
T1 MRI tissue probability mask
T1 MRI Variance
T1 MRI White Matter Ridges
T1 MRI White Matter Ridges PetSpc
T2 Diffusion MR
T2 MRI
Template
Tissue probability map
Tissue Probability Map Template
Topo Brain
TPM HDW DARTEL created template
TPM HDW DARTEL template
TPM template
Transmission PET
Transverse Diffusion Coefficient
Undistorted Shift Map
Ventricles Mask
Ventricule ROI
Volume Ratio
White Mask Corrected
White Mask Corrected DARTEL
White Mask Corrected DARTEL MNI
White Mask Corrected DISCO
White Mask Corrected DISCO DARTEL
White Mask Corrected DISCO DARTEL MNI
White matter Probability Map
WM Probability Map